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1

RNA Sequencing Data: Hitchhiker's Guide to Expression Analysis

Van den Berge, Koen, Hembach, Katharina M., Soneson, Charlotte, Tiberi, Simone, Clement, Lieven, Love, Michael I., Patro, Rob, Robinson, Mark D.

Journal:

Annual Review of Biomedical Data Science

Year:

2019

Language:

english

File:

PDF, 10.37 MB

english, 2019

2

Toward a formalized account of attitudes: The Causal Attitude Network (CAN) model.

Dalege, Jonas, Borsboom, Denny, van Harreveld, Frenk, van den Berg, Helma, Conner, Mark, van der Maas, Han L. J.

Journal:

Psychological Review

Year:

2016

Language:

english

File:

PDF, 334 KB

english, 2016

3

Do Physical Activity, Social Cohesion, and Loneliness Mediate the Association Between Time Spent Visiting Green Space and Mental Health?

van den Berg, Magdalena M., van Poppel, Mireille, van Kamp, Irene, Ruijsbroek, Annemarie, Triguero-Mas, Margarita, Gidlow, Christoffer, Nieuwenhuijsen, Mark J., Gražulevičiene, Regina, van Mechelen, W

Journal:

Environment and Behavior

Year:

2017

Language:

english

File:

PDF, 528 KB

english, 2017

4

[IEEE 2019 IEEE International Symposium on Technology and Society (ISTAS) - Medford, MA, USA (2019.11.15-2019.11.16)] 2019 IEEE International Symposium on Technology and Society (ISTAS) - The Future of Online Advertising: Thoughts on Emerging Issues in Privacy, Information Bubbles, and Disinformation

Kitts, Brendan, McCoy, Nathan, van den Berg, Mark

Year:

2019

Language:

english

File:

PDF, 5.51 MB

english, 2019

5

A Combined Molecular Phylogeny of Encyclia (Orchidaceae) and Relationships within Laeliinae

Wesley E. Higgins, Cássio van den Berg and W. Mark Whitten

Journal:

Year:

2003

Language:

english

File:

PDF, 1.86 MB

english, 2003

6

[IEEE 2013 IEEE International Symposium on Information Theory (ISIT) - Istanbul, Turkey (2013.07.7-2013.07.12)] 2013 IEEE International Symposium on Information Theory - Lower bounds for quantized matrix completion

Wootters, Mary, Plan, Yaniv, Davenport, Mark A., van den Berg, Ewout

Year:

2013

Language:

english

File:

PDF, 134 KB

english, 2013

7

An updated classification of Orchidaceae

Chase, Mark W., Cameron, Kenneth M., Freudenstein, John V., Pridgeon, Alec M., Salazar, Gerardo, van den Berg, Cássio, Schuiteman, André

Journal:

Botanical Journal of the Linnean Society

Year:

2015

Language:

english

File:

PDF, 434 KB

english, 2015

8

Prolonged Exposure vs Eye Movement Desensitization and Reprocessing vs Waiting List for Posttraumatic Stress Disorder in Patients With a Psychotic Disorder

van den Berg, David P. G., de Bont, Paul A. J. M., van der Vleugel, Berber M., de Roos, Carlijn, de Jongh, Ad, Van Minnen, Agnes, van der Gaag, Mark

Journal:

JAMA Psychiatry

Year:

2015

Language:

english

File:

PDF, 245 KB

english, 2015

9

An Overview of the Phylogenetic Relationships within Epidendroideae Inferred from Multiple DNA Regions and Recircumscription of Epidendreae and Arethuseae (Orchidaceae)

Cássio van den Berg, Douglas H. Goldman, John V. Freudenstein, Alec M. Pridgeon, Kenneth M. Cameron and Mark W. Chase

Journal:

American Journal of Botany

Year:

2005

Language:

english

File:

PDF, 2.47 MB

english, 2005

10

Molecular and Cytological Examination of Calopogon (Orchidaceae, Epidendroideae): Circumscription, Phylogeny, Polyploidy, and Possible Hybrid Speciation

Douglas H. Goldman, Robert K. Jansen, Cassio van den Berg, Ilia J. Leitch, Michael F. Fay and Mark W. Chase

Journal:

American Journal of Botany

Year:

2004

Language:

english

File:

PDF, 4.53 MB

english, 2004

11

CBT in the prevention of psychosis and other severe mental disorders in patients with an at risk mental state: A review and proposed next steps

van der Gaag, Mark, van den Berg, David, Ising, Helga

Journal:

Schizophrenia Research

Year:

2017

Language:

english

File:

PDF, 339 KB

english, 2017

12

Phylogenetic systematics of subtribe Spiranthinae (Orchidaceae: Orchidoideae: Cranichideae) based on nuclear and plastid DNA sequences of a nearly complete generic sample

Salazar, Gerardo A, Batista, João A N, Cabrera, Lidia I, van Den Berg, Cássio, Whitten, W Mark, Smidt, Eric C, Buzatto, Cristiano Roberto, Singer, Rodrigo B, Gerlach, Günter, Jiménez-Machorro, Rolando

Journal:

Botanical Journal of the Linnean Society

Year:

2018

File:

PDF, 11.85 MB

2018

13

Dose evaluation of fast synthetic-CT generation using a generative adversarial network for general pelvis MR-only radiotherapy

Maspero, Matteo, Savenije, Mark H F, Dinkla, Anna M, Seevinck, Peter R, Intven, Martijn P W, Juergenliemk-Schulz, Ina M, Kerkmeijer, Linda G W, Van den Berg, Cornelis A T

Journal:

Physics in Medicine and Biology

Year:

2018

Language:

english

File:

PDF, 1.77 MB

english, 2018

14

[OA127] Cone-beam CT intensity correction for adaptive radiotherapy of the prostate using deep learning

Kurz, Christopher, Hansen, David C., Savenije, Mark H.F., Landry, Guillaume, Maspero, Matteo, Kamp, Florian, Parodi, Katia, Belka, Claus, van den Berg, Cornelius

Journal:

Year:

2018

Language:

english

File:

PDF, 39 KB

english, 2018

15

The Vulnerability Scan, a Web Tool to Increase Institutional Biosecurity Resilience

Meulenbelt, Stephanie E., van Passel, Mark W. J., de Bruin, Arnout, van den Berg, Linda M., Schaap, Mirjam M., Rutjes, Saskia A., Jacobi, André J., Agterberg, Marja C., de Hoog, Carin, van Willigen, G

Journal:

Frontiers in Public Health

Year:

2019

Language:

english

File:

PDF, 828 KB

english, 2019

16

Optically coherent nitrogen-vacancy centers in μm-thin etched diamond membranes

Ruf, Maximilian, IJspeert, Mark, van Dam, Suzanne, de Jong, Nick, van den Berg, Hans, Evers, Guus, Hanson, Ronald

Journal:

Year:

2019

Language:

english

File:

PDF, 10.70 MB

english, 2019

17

Effect of acetazolamide on pulmonary and muscle gas exchange during normoxic and hypoxic exercise

Amy M. Jonk, Irene P. Van Den Berg, I. Mark Olfert, D. Walter Wray, Tatsuya Arai, Susan R. Hopkins, Peter D. Wagner

Journal:

The Journal of Physiology

Year:

2007

Language:

english

File:

PDF, 511 KB

english, 2007

18

Synthesis of Eight 1-Deoxynojirimycin Isomers from a Single Chiral Cyanohydrin

Adrianus M. C. H. van den Nieuwendijk, Richard J. B. H. N. van den Berg, Mark Ruben, Martin D. Witte, Johannes Brussee, Rolf G. Boot, Gijsbert A. van der Marel, Johannes M. F. G. Aerts, Herman S. Over

Journal:

European Journal of Organic Chemistry

Year:

2012

Language:

english

File:

PDF, 526 KB

english, 2012

19

Effectiveness of percutaneous laser disc decompression versus conventional open discectomy in the treatment of lumbar disc herniation; design of a prospective randomized controlled trial

Patrick A Brouwer, Wilco C Peul, Ronald Brand, Mark P Arts, Bart W Koes, A van den Annette Berg, Mark A van Buchem

Journal:

BMC Musculoskeletal Disorders

Year:

2009

Language:

english

File:

PDF, 571 KB

english, 2009

20

Treating trauma in psychosis with EMDR: A pilot study

David P.G. van den Berg, Mark van der Gaag

Journal:

Journal of Behavior Therapy and Experimental Psychiatry

Year:

2012

Language:

english

File:

PDF, 199 KB

english, 2012

21

Organic carbon normalisation of PCB, PAH and pesticide concentrations in suspended solids

Albert A. Koelmans, Frits Gillissen, Willeke Makatita, Mark Van Den Berg

Journal:

Year:

1997

Language:

english

File:

PDF, 851 KB

english, 1997

22

Beziehungsarbeit unter den Bedingungen von Freiwilligkeit und Zwang

Böhle, Andreas, Grosse, Martin, Schrödter, Mark, van den Berg, Willi

Journal:

Soziale Passagen

Year:

2012

Language:

german

File:

PDF, 365 KB

german, 2012

23

Velocity Profile inside Piezoacoustic Inkjet Droplets in Flight: Comparison between Experiment and Numerical Simulation

van der Bos, Arjan, van der Meulen, Mark-Jan, Driessen, Theo, van den Berg, Marc, Reinten, Hans, Wijshoff, Herman, Versluis, Michel, Lohse, Detlef

Journal:

Physical Review Applied

Year:

2014

Language:

english

File:

PDF, 2.34 MB

english, 2014

24

High-efficiency ballistic electrostatic generator using microdroplets

Xie, Yanbo, Bos, Diederik, de Vreede, Lennart J., de Boer, Hans L., van der Meulen, Mark-Jan, Versluis, Michel, Sprenkels, Ad J., van den Berg, Albert, Eijkel, Jan C. T.

Journal:

Nature Communications

Year:

2014

Language:

english

File:

PDF, 828 KB

english, 2014

25

Synthesis of l - altro -1-Deoxynojirimycin, d - allo- 1-Deoxynojirimycin, and d - galacto- 1-Deoxynojirimycin from a Single Chiral Cyanohydrin

van den Nieuwendijk, Adrianus M. C. H., Ruben, Mark, Engelsma, Sander E., Risseeuw, Martijn D. P., van den Berg, Richard J. B. H. N., Boot, Rolf G., Aerts, Johannes M., Brussee, Johannes, van der Mare

Journal:

Organic Letters

Year:

2010

Language:

english

File:

PDF, 230 KB

english, 2010

26

Percutaneous laser disc decompression versus conventional microdiscectomy in sciatica: a randomized controlled trial

Brouwer, Patrick A., Brand, Ronald, van den Akker-van Marle, M. Elske, Jacobs, Wilco C.H., Schenk, Barry, van den Berg-Huijsmans, Annette A., Koes, Bart W., van Buchem, M.A., Arts, Mark P., Peul, Wilc

Journal:

The Spine Journal

Year:

2015

Language:

english

File:

PDF, 996 KB

english, 2015

27

International Collaboration under Threat: A Field Study in Kabul

Dechesne, Mark, Berg, Coen van den, Soeters, Joseph

Journal:

Conflict Management and Peace Science

Year:

2007

Language:

english

File:

PDF, 79 KB

english, 2007

28

An Expanded Plastid DNA Phylogeny of Orchidaceae and Analysis of Jackknife Branch Support Strategy

John V. Freudenstein, Cássio van den Berg, Douglas H. Goldman, Paul J. Kores, Mia Molvray and Mark W. Chase

Journal:

American Journal of Botany

Year:

2004

Language:

english

File:

PDF, 2.08 MB

english, 2004

29

Characterization of hematopoietic GATA transcription factor expression in mouse and human dendritic cells

Scheenstra, Maaike R., Salunkhe, Vishal, De Cuyper, Iris M., Hoogenboezem, Mark, Li, Eveline, Kuijpers, Taco W., van den Berg, Timo K., Gutiérrez, Laura

Journal:

Blood Cells, Molecules, and Diseases

Year:

2015

Language:

english

File:

PDF, 1.08 MB

english, 2015

30

Growth Rates of Sugar Maple Trees Tapped for Maple Syrup Production Using High-Yield Sap Collection Practices

van den Berg, Abby K., Perkins, Timothy D., Isselhardt, Mark L., Wilmot, Timothy R.

Journal:

Year:

2016

Language:

english

File:

PDF, 237 KB

english, 2016

31

Predicting trauma-focused treatment outcome in psychosis

van den Berg, David P.G., van der Vleugel, Berber M., de Bont, Paul A.J.M., Staring, Anton B.P., Kraan, Tamar, Ising, Helga, de Roos, Carlijn, de Jongh, Ad, van Minnen, Agnes, van der Gaag, Mark

Journal:

Schizophrenia Research

Year:

2016

Language:

english

File:

PDF, 344 KB

english, 2016

32

The contributions of family care-givers at end of life: A national post-bereavement census survey of cancer carers’ hours of care and expenditures

Rowland, Christine, Hanratty, Barbara, Pilling, Mark, van den Berg, Bernard, Grande, Gunn

Journal:

Palliative Medicine

Year:

2017

Language:

english

File:

PDF, 694 KB

english, 2017

33

Role of nitrite in the competition between denitrification and DNRA in a chemostat enrichment culture

van den Berg, Eveline M., Rombouts, Julius L., Kuenen, J. Gijs, Kleerebezem, Robbert, van Loosdrecht, Mark C. M.

Journal:

Year:

2017

Language:

english

File:

PDF, 1.04 MB

english, 2017

34

CMV immune evasion and manipulation of the immune system with aging

Jackson, Sarah E., Redeker, Anke, Arens, Ramon, van Baarle, Debbie, van den Berg, Sara P. H., Benedict, Chris A., Čičin-Šain, Luka, Hill, Ann B., Wills, Mark R.

Journal:

Year:

2017

Language:

english

File:

PDF, 926 KB

english, 2017

35

Long-term outcomes of trauma-focused treatment in psychosis

van den Berg, David, de Bont, Paul A. J. M., van der Vleugel, Berber M., de Roos, Carlijn, de Jongh, Ad, van Minnen, Agnes, van der Gaag, Mark

Journal:

The British Journal of Psychiatry

Year:

2018

Language:

english

File:

PDF, 148 KB

english, 2018

36

Governance Options to Enhance Ecosystem Services in Cocoa, Soy, Tropical Timber and Palm Oil Value Chains

Ingram, Verina, van den Berg, Jolanda, van Oorschot, Mark, Arets, Eric, Judge, Lucas

Journal:

Environmental Management

Year:

2018

Language:

english

File:

PDF, 685 KB

english, 2018

37

Development of a Biosecurity Checklist for Laboratory Assessment and Monitoring

Brizee, Sabrina, van Passel, Mark W. J., van den Berg, Linda M., Feakes, Daniel, Izar, Ana, Tham Bee Lin, Kathryn, Podin, Yuwana, Yunus, Zalini, Bleijs, Diederik A.

Journal:

Applied Biosafety

Year:

2019

Language:

english

File:

PDF, 138 KB

english, 2019

38

Conservative treatment of anterior chronic exertional compartment syndrome in the military, with a mid-term follow-up

Zimmermann, Wes O, Hutchinson, Mark Robert, Van den Berg, Ruud, Hoencamp, Rigo, Backx, Frank J G, Bakker, Eric W P

Journal:

BMJ Open Sport & Exercise Medicine

Year:

2019

Language:

english

File:

PDF, 288 KB

english, 2019

39

Optically coherent nitrogen-vacancy centers in μm-thin etched diamond membranes

Ruf, Maximilian, IJspeert, Mark, van Dam, Suzanne, de Jong, Nick, van den Berg, Hans, Evers, Guus, Hanson, Ronald

Journal:

Year:

2019

File:

PDF, 10.70 MB

2019

40

CBCT correction using a cycle-consistent generative adversarial network and unpaired training to enable photon and proton dose calculation

Kurz, Christopher, Maspero, Matteo, Savenije, Mark H F, Landry, Guillaume, Kamp, Florian, Pinto, Marco, Li, Minglun, Parodi, Katia, Belka, Claus, Van den Berg, Cornelis A T

Journal:

Physics in Medicine and Biology

Year:

2019

Language:

english

File:

PDF, 1.57 MB

english, 2019

41

Too many species: morphometrics, molecular phylogenetics and genome structure of a Brazilian species complex in Epidendrum (Laeliinae; Orchidaceae) reveal fewer species than previously thought

Pessoa, Edlley M, Cordeiro, Joel M P, Felix, Leonardo P, Almeida, Erton M, Costa, Lucas, Nepomuceno, Ãlvaro, Souza, Gustavo, Chase, Mark W, Alves, Marccus, Van Den Berg, CÃ¡ssio

Journal:

Botanical Journal of the Linnean Society

Year:

2020

File:

PDF, 1.70 MB

2020

42

Antivibration Electrode Support for Shipboard Stripping Voltammetry

Annette P Aldrich, Mark Jahme, Constant M. G. van den Berg

Journal:

Electroanalysis

Year:

1999

Language:

english

File:

PDF, 148 KB

english, 1999

43

The functional variant of the inhibitory Fcγ receptor IIb (CD32B) is associated with the rate of radiologic joint damage and dendritic cell function in rheumatoid arthritis

Timothy R. D. J. Radstake, Barbara Franke, Mark H. Wenink, Karin C. A. M. Nabbe, Marieke J. H. Coenen, Paco Welsing, Ezio Bonvini, Scott Koenig, Wim B. van den Berg, Pilar Barrera, Piet L. C. M. van R

Journal:

Arthritis & Rheumatism

Year:

2006

Language:

english

File:

PDF, 151 KB

english, 2006

44

Increased expression of interleukin-22 by synovial Th17 cells during late stages of murine experimental arthritis is controlled by interleukin-1 and enhances bone degradation

Renoud J. Marijnissen, Marije I. Koenders, Ruben L. Smeets, Mark H. T. Stappers, Cheryl Nickerson-Nutter, Leo A. B. Joosten, Annemieke M. H. Boots, Wim B. van den Berg

Journal:

Arthritis & Rheumatism

Year:

2011

Language:

english

File:

PDF, 640 KB

english, 2011

45

Impaired dendritic cell proinflammatory cytokine production in psoriatic arthritis

Mark H. Wenink, Kim C. M. Santegoets, John Butcher, Lenny van Bon, Femke G. M. Lamers-Karnebeek, Wim B. van den Berg, Piet L. C. M. van Riel, Iain B. McInnes, Timothy R. D. J. Radstake

Journal:

Arthritis & Rheumatism

Year:

2011

Language:

english

File:

PDF, 314 KB

english, 2011

46

Myocardial resistance assessed by guidewire-based pressure-temperature measurement: In vitro validation

Wilbert Aarnoudse, Petra van den Berg, Frans van de Vosse, Maartje Geven, Marcel Rutten, Mark van Turnhout, William Fearon, Bernard De Bruyne, Nico Pijls

Journal:

Catheterization and Cardiovascular Interventions

Year:

2004

Language:

english

File:

PDF, 162 KB

english, 2004

47

ChemInform Abstract: Fluorescence Correlation Spectroscopy of Flavins and Flavoproteins

Antonie J. W. G. Visser, Petra A. W. van den Berg, Mark A. Hink, Valentin N. Petushkov

Journal:

Year:

2001

File:

PDF, 24 KB

2001

48

ChemInform Abstract: Synthesis and Evaluation of D-gluco-Pyranocyclopropyl Amines as Potential Glucosidase Inhibitors.

Martijn D. P. Risseeuw, Richard J. B. H. N. van den Berg, Wilma E. Donker-Koopman, Gijs A. van der Marel, Johannes M. F. G. Aerts, Mark Overhand, Herman S. Overkleeft

Journal:

Year:

2010

File:

PDF, 44 KB

2010

49

Air injection into concentrated maple sap during processing: impact on syrup composition and flavour

Abby K van den Berg, Timothy D Perkins, Mark L Isselhardt, Mary An Godshall, Steven W Lloyd

Journal:

Journal of the Science of Food and Agriculture

Year:

2009

Language:

english

File:

PDF, 85 KB

english, 2009

50

Macrophages enhance the radiosensitizing activity of lipid A: A novel role for immune cells in tumor cell radioresponse

Mark De Ridder, Valeri N. Verovski, Martine I. Darville, Dirk L. Van Den Berge, Christinne Monsaert, Decio L. Eizirik, Guy A. Storme

Journal:

International Journal of Radiation Oncology*Biology*Physics

Year:

2004

Language:

english

File:

PDF, 274 KB

english, 2004